1. Synthesis and Characterization of Self-assembled DNA Nanostructures
Chenxiang Lin, Yonggang Ke, Rahul Chhabra, Jaswinder Sharma, Yan Liu, and Hao Yan
2. Protocols for Self-assembly and Imaging of DNA Nanostructures
Thomas L. Sobey and Friedrich C. Simmel
3. Self-Assembly of Metal-DNA Triangles and DNA Nanotubes with Synthetic Junctions
Hua Yang, Pik Kwan Lo, Christopher K. McLaughlin, Graham D. Hamblin, Faisal A. Aldaye, and Hanadi F. Sleiman
4. DNA-Templated Pd Conductive Metallic Nanowires
Khoa Nguyen, Stephane Campidelli, and Arianna Filoramo
5. A Method to Map Spatiotemporal pH Changes Inside Living Cells using a pH Triggered DNA Nanoswitch
Souvik Modi and Yamuna Krishnan
6. Control of Helical Handedness in DNA and PNA Nanostructures
Roberto Corradini, Tullia Tedeschi, Stefano Sforza, Mark M. Green, and Rosangela Marchelli
7. G-quartet, G-quadruplex, and G-wire Regulated by Chemical Stimuli
Daisuke Miyoshi and Naoki Sugimoto
8. Preparation and Atomic Force Microscopy of Quadruplex DNA
James Vesenka
9. Synthesis of Long DNA-based Nanowires
Alexander Kotlyar
10. G-wire Synthesis and Modification with Gold-nanoparticle
Christian Leiterer, Andrea Csaki, and Wolfgang Fritzsche
11. Preparation of DNA Nanostructures with Repetitive Binding Motifs by Rolling Circle Amplification
Edda Reiß, Ralph Hölzel, and Frank F. Bier
12. Controlled Confinement of DNA at the Nanoscale: Nanofabrication and Surface Bio-functionalization
Matteo Palma, Justin Abramson, Alon A. Gorodetsky, Colin Nuckolls, Michael P. Sheetz, Shalom J. Wind, and James Hone
13. Templated Assembly of DNA Origami Gold Nanoparticle Arrays on Lithographically Patterned Surfaces
Albert M. Hung and Jennifer N. Cha
14. DNA-modified Single Crystal and Nanoporous Silicon
Andrew Houlton, Bernard A. Connolly, Andrew R. Pike, and Benjamin R. Horrocks
15. The Atomic Force Microscopy as a Lithographic Tool: Nanografting of DNA Nanostructures for Biosensing Applications
Matteo Castronovo and Denis Scaini
16. Trapping and Immobilization of DNA Molecules Between Nanoelectrodes
Anton Kuzyk, J. Jussi Toppari, and Päivi Törmä
17. DNA Contour Length Measurements as a Tool for the Structural Analysis of DNA and Nucleoprotein Complexes
Claudio Rivetti
18. DNA Molecular Handles for Single Molecule Protein Folding Studies by Optical Tweezers
Ciro Cecconi, Elizabeth A. Shank, Susan Marqusee, and Carlos Bustamante
19. Optimal Practices for Surface-tethered Single Molecule Total Internal Reflection Fluorescence Resonance Energy Transfer Analysis
Matt V. Fagerburg and Sanford H. Leuba
20. Engineering Mononucleosomes for Single-Pair FRET Experiments
Wiepke J.A. Koopmans, Ruth Buning, and John van Noort
21. Measuring DNA-Protein Binding Affinity on a Single Molecule Using Optical Tweezers
Micah J. McCauley and Mark C. Williams
22. Modeling Nanopores for Sequencing DNA
Jeffrey R. Comer, David B. Wells, a
